BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005C02SP1|AL425344
(939 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1459 1586 0.0
>3x_Contig1459
Length = 6711
Score = 1586 bits (776), Expect = 0.0
Identities = 879/939 (93%), Gaps = 2/939 (0%)
Strand = Plus / Minus
Query: 3 atgagagggcaaaggatttcaagctttcttactggctagttaatgaactgggtgttgtcg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5454 atgagagggcaaaggatttcaagctttcttactggctagttaatgaactgggtgttgtcg 5395
Query: 63 cgattccaccgacagaattctacattaaagaacatgaaaaggctgcagaaaacttgcyaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5394 cgattccaccgacagaattctacattaaagaacatgaaaaggctgcagaaaacttgctaa 5335
Query: 123 gatttgcggtttgcmaagataaccaatatttagaagaatctgtcgaaagattaagattat 182
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5334 gatttgcggtttgcaaagataaccaatatttagaagaatctgtcgaaagattaagattat 5275
Query: 183 tgamagactacttatgamaagtgtgtcaacggaatatcggatagtmatctctcgattgcc 242
||| ||||||||||||| |||||||| |||||||||||||||||| |||||||||||||
Sbjct: 5274 tgaaagactacttatgaaaagtgtgtaaacggaatatcggatagtaatctctcgattgca 5215
Query: 243 atyatttatgcytttgttttttatatacgtygatcagatagaataaactcgcyagtmaaa 302
|| |||||||| |||||||||||||||||| ||||||||||||||||||||| ||| |||
Sbjct: 5214 attatttatgcttttgttttttatatacgttgatcagatagaataaactcgctagtaaaa 5155
Query: 303 caagcggcgtttctgattgtcaagtgttcattacttggtgctgtaaaamtacagtttttc 362
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5154 caagcggcgtttctgattgtcaagtgttcattacttggtgctgtaaaaatacagtttttc 5095
Query: 363 tagtttaagaacgamaatmaagaatccattaagtgcagaattatttagcctgtgcatagg 422
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5094 tagtttaagaacgaaaataaagaatccattaagtgcagaattatttagcctgtgcatagg 5035
Query: 423 acagtcatatatmysgcttatcammycmmyygtmtaaygtyacgttgaaaattcatcaac 482
||||| |||||| | |||| | || ||| || |||||||||||||||||||
Sbjct: 5034 acagttatatatatggattattaaattaattgtataatgttacgttgaaaattcatcaac 4975
Query: 483 yacgaatyttmamagttgatctcaaaggcgtaccacagtmagcctgaacttaagacgtga 542
|||||| || | |||||||||||||||||||||| ||| ||| ||||||||||| ||||
Sbjct: 4974 tacgaattttaaaagttgatctcaaaggcgtaccaaagtaagcttgaacttaagaagtga 4915
Query: 543 maatmaagctcagaacgaacgamcgaacaamagamggtcgacmatcacagtctggggggt 602
||| ||||||||||||||||| ||||||| ||| |||||| || ||||| ||||||||
Sbjct: 4914 aaataaagctcagaacgaacgaacgaacaaaagaaggtcgaaaataacagtatggggggt 4855
Query: 603 caggtatttcmcacygttatgattgtgaagaagaggttccaaaactatagttggaacatt 662
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4854 aaggtatttaaaactgttatgattgtgaagaagaggttccaaaactatagttggaacatt 4795
Query: 663 agtcgttacgattttwataaattgatganatcaattcatcaatttataagacgaaagcag 722
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4794 agtcgttacgattttaataaattgatgaaatcaattcatcaatttataagacgaaagcag 4735
Query: 723 cgata-scatcaagatggttaccaacccggcctgcacgttggcagcagcaccttcataag 781
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4734 cgatagccatcaagatggttaccaacccggcctgcacgttggcagcagcaccttcataag 4675
Query: 782 tggaaacaccggattgagtgg-aactctgatagttgtgatactgctggatggcttaccag 840
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4674 tggaaacaccggattgagtggaaactctgatagttgtgatactgctggatggcttaccag 4615
Query: 841 cttcagtaccagcggcagtggtaacaccttctgcacctggagcaccagtagtaccaacag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4614 cttcagtaccagcggcagtggtaacaccttctgcacctggagcaccagtagtaccaacag 4555
Query: 901 cggtagtaacaccagtagcaccagtagcaccagtwacaa 939
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 4554 cggtagtaacaccagtagcaccagtagcaccagtaacaa 4516
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4193
Number of Sequences: 1807
Number of extensions: 4193
Number of successful extensions: 111
Number of sequences better than 1.0e-20: 1
length of query: 939
length of database: 10,358,551
effective HSP length: 16
effective length of query: 923
effective length of database: 10,329,639
effective search space: 9534256797
effective search space used: 9534256797
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 11 (23.0 bits)
S2: 49 (100.7 bits)